TRANSFAC References


Wingender E.

The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation.

Brief Bioinform. 9, 326-332 (2008). PMID: 18436575

 

Matys, V., Kel-Margoulis, O., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., Reuter, I., Chekmenev, D., Krull, M., Hornischer, K., Voss, N., Stegmaier, P., Lewicki-Potapov, B., Saxel, H., Kel, A., Wingender, E.

TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

Nucleic Acids Res. 34, D108-D110 (2006). PMID: 16381825

 

Matys, V., Fricke, E., Geffers, R., Gößling, E., Haubrock, M., Hehl, R., Hornischer, K., Kel, A.E., Kel-Margoulis, O.V., Kloos, D.U., Land, S., Lewicki-Potapov, B., Michael, H., Münch, R., Reuter, I., Rotert, S., Saxel, H., Scheer, M., Thiele, S., Wingender, E.

TRANSFAC: transcriptional regulation, from patterns to profiles

Nucleic Acids Res. 31, 374-378 (2003). PMID: 16381825

 

Wingender, E.

TRANSFAC®, TRANSPATH® and CYTOMER® as starting points for an ontology of regulatory networks

In Silico Biol. 4, 0006 (2003). PMID: 15089753

 

D`Souza, U.M., Kel, A., Sluyter, F.

From Transcriptional Regulation to Aggressive Behaviour

Behaviour Genetics 33, 5 (2003). PMID: 14574132

 

 

TRANSCompel References


Matys, V., Kel-Margoulis, O., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., Reuter, I., Chekmenev, D., Krull, M., Hornischer, K., Voss, N., Stegmaier, P., Lewicki-Potapov, B., Saxel, H., Kel, A., Wingender, E.

TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

Nucleic Acids Res. 34, D108-110 (2006) PMID: 16381825

 

Kel-Margoulis, O.V., Kel, A.E., Reuter, I., Deineko, I.V., Wingender, E.

TRANSCompel: a database on composite regulatory elements in eukaryotic genes

Nucleic Acids Res. 30, 332-334 (2002). PMID: 11752329

 

 

TRANSPro References


Matys, V., Kel-Margoulis, O.V., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., Reuter, I., Chekmenev, D., Krull, M., Hornischer, K., Voss, N., Stegmaier, P., Lewicki-Potapov, B., Saxel, H., Kel, A.E., Wingender, E.
TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes
Nucleic Acids Res. 34 108-10. (2006). PMID: 16381825

 

 

S/MARt DB References


Liebich, I., Bode, J., Frisch, M., Wingender, E.

S/MARt DB: a database on scaffold/matrix attached regions

Nucleic Acids Res. 30, 372-374 (2002). PMID: 11752340

 

 

PathoDB References


Wingender, E., Chen, X., Fricke, E., Geffers, R., Hehl, R., Liebich, I., Krull, M., Matys, V., Michael, H., Ohnhauser, R., Pruess, M., Schacherer, F., Thiele, S., Urbach, S.

The TRANSFAC system on gene expression regulation

Nucleic Acids Res. 29, 281-3 (2001). PMID: 11125113

 

Wingender, E., Chen, X., Hehl, R., Karas, H., Liebich, I., Matys, V., Meinhardt, T., Pruess, M., Reuter, I., Schacherer, F.

TRANSFAC: an integrated system for gene expression regulation

Nucleic Acids Res. 28, 316-319 (2000). PMID: 10592259

 

 

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