TRANSFAC^® Professional: The most comprehensive collection of eukaryotic gene regulation data

Your Advantage

Leverage the latest DNA binding, expression, and regulation data with access to expert manual curation

• 35,000 Factor-site interactions

• 707,000 ChIP fragments

• 284,000 Promoter sequences

• 21,000 References

• 300 Species

To learn more about this product, read statistics, user publications, or sign up for a free trial.

Focus

Save time on your gene regulation analyses with manually curated data and advanced tools, giving you access to:

• Experimentally proven transcription factor binding sites & composite elements
• Positional weight matrices
• Promoter sequences containing TSSs, SNPs and other features
• miRNAs and their target sequences
• Extensive structural and functional information on transcription factors including our transcription factor classification

With optional inclusion of:

• Pathologically relevant mutations in transcription factors or their binding sites - PathoDB®
• Scaffold or matrix attached regions (S/MARs) of eukaryotic genomes and their binding proteins - S/MARt DB™

Understand

Use the experimental data in the included tools to

• Analyze DNA sequences for transcription factor binding sites using Match™ and Patch™, matrix and pattern based search tools
• Visualize gene-regulatory networks
• Find in-vivo binding sequences from ChIP on chip experiments
• Extend these capabilities with BIOBASE’s ExPlain™ analysis system.

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Learn more about different components of TRANSFAC, TRANSCompel™ and TRANSPro™ 

Learn about TRANSFAC Affymetrix GeneChip® Compatibility