Sweeten your research with BIOBASE worm data.

The Worm Proteome Database in BKL PROTEOME is an online resource containing manually curated details from the C. elegans PubMed literature in a highly structured and easily searchable format. This powerful query system, with specialized tools for  gene set analysis and pathway visualization, allows scientists to quickly find answers to questions important for their research – without performing a lengthy literature search, thus saving time and facilitating better research decisions.  

A subscription to WormPD (in BKL PROTEOME) provides you with:

• Over 10 years of C. elegans literature organized in a one-protein-one-report format
• Searchable access to over 100,000 functional assignments in our Ontology tool providing the ability to:
• Find proteins with shared characteristics such as mutant phenotypes, expression, and molecular function 
• Map functional attributes to your uploaded gene sets
• Analyse gene sets for statistical over-representation of specific characteristics
• A visualization tool for building custom networks using experimentally demonstrated protein-protein binding interactions
• Detailed annotations in free text form containing specifics on genetic interactions, human disease relationships, functional complementation, and more, that you won't find in other resources.
• Seamless access to the same detailed, high-quality information for closely related fungal pathogen, mammalian, and plant proteins, providing comparative systems to enhance your research on human disease and aging models.

Biology Simplified

Make sense of your high throughput data with our Bioknowledge Retriever tool that lets you find proteins with shared characteristics and allows functional analysis of experimental gene sets.

• Perform virtual experiments.
• Find overrepresented processes, diseases, or gene families in your dataset.
• Uncover interaction networks.

Your Advantage

WormPD integrates gene and protein interaction data, mutant phenotype, expression, function, and protein family data with:

• Full genome of C. elegans.
• 280,000 free text, manual annotations.
• 76,000 Gene Ontology associations.
• 18,000 phenotype associations.
• 8,000 expression assignments.

To learn more about this product, click to access statistics, read user publications, or sign up for a free trial.